Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 OR2I1P-209ENST00000641730 5365 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
DEFA4P12838 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 PI4KAP1-204ENST00000612579 1703 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 KRT8P49-201ENST00000604166 1432 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.38□□□□□ -0.27
DEFA4P12838 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 PCDHA3-202ENST00000532566 4594 ntBASIC13.37□□□□□ -0.27
DEFA4P12838 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.37□□□□□ -0.27
DEFA4P12838 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 AP002414.1-201ENST00000391405 1147 ntBASIC13.37□□□□□ -0.27
DEFA4P12838 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.37□□□□□ -0.27
DEFA4P12838 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.37□□□□□ -0.27
DEFA4P12838 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.37□□□□□ -0.27
DEFA4P12838 AC073648.2-201ENST00000510116 352 ntBASIC13.37□□□□□ -0.27
DEFA4P12838 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.37□□□□□ -0.27
DEFA4P12838 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.37□□□□□ -0.27
DEFA4P12838 AC006557.2-201ENST00000592985 1240 ntBASIC13.37□□□□□ -0.27
DEFA4P12838 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DEFA4P12838 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
DEFA4P12838 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
DEFA4P12838 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
DEFA4P12838 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.36□□□□□ -0.27
DEFA4P12838 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.36□□□□□ -0.27
DEFA4P12838 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.36□□□□□ -0.27
DEFA4P12838 CLEC4GP1-201ENST00000596555 870 ntBASIC13.36□□□□□ -0.27
DEFA4P12838 IFNL4P1-201ENST00000607083 540 ntBASIC13.36□□□□□ -0.27
DEFA4P12838 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.36□□□□□ -0.27
DEFA4P12838 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
DEFA4P12838 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DEFA4P12838 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms