Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 AP005117.1-201ENST00000584346 1413 ntBASIC15.5■□□□□ 0.07
MT-ND1P03886 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.5■□□□□ 0.07
MT-ND1P03886 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND1P03886 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.49■□□□□ 0.07
MT-ND1P03886 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 ARMC10P1-201ENST00000313754 855 ntBASIC15.49■□□□□ 0.07
MT-ND1P03886 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.49■□□□□ 0.07
MT-ND1P03886 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.49■□□□□ 0.07
MT-ND1P03886 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MT-ND1P03886 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND1P03886 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-ND1P03886 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
MT-ND1P03886 AL445228.2-201ENST00000605589 952 ntBASIC15.49■□□□□ 0.07
MT-ND1P03886 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MT-ND1P03886 KRT8P39-201ENST00000396270 1433 ntBASIC15.49■□□□□ 0.07
MT-ND1P03886 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MT-ND1P03886 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-ND1P03886 AC136621.1-201ENST00000624017 2304 ntBASIC15.49■□□□□ 0.07
MT-ND1P03886 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-ND1P03886 AC069224.1-201ENST00000566372 1715 ntBASIC15.48■□□□□ 0.07
MT-ND1P03886 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-ND1P03886 PRYP5-201ENST00000451909 266 ntBASIC15.48■□□□□ 0.07
MT-ND1P03886 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-ND1P03886 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-ND1P03886 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms