Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 ALOX12P2-203ENST00000570921 1945 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
ZBED1O96006 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 LINC01144-201ENST00000626198 1710 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZBED1O96006 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 MIR346-201ENST00000362234 95 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.3■□□□□ 0.36
ZBED1O96006 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 AC023141.5-201ENST00000458585 616 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 AC092183.1-201ENST00000469884 875 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.3■□□□□ 0.36
ZBED1O96006 AC105233.2-201ENST00000523697 349 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 AF228730.5-201ENST00000530288 346 ntBASIC17.3■□□□□ 0.36
ZBED1O96006 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.3■□□□□ 0.36
ZBED1O96006 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.3■□□□□ 0.36
ZBED1O96006 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.3■□□□□ 0.36
ZBED1O96006 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZBED1O96006 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.3■□□□□ 0.36
ZBED1O96006 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 KRT18P32-201ENST00000424695 1287 ntBASIC17.29■□□□□ 0.36
ZBED1O96006 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.29■□□□□ 0.36
ZBED1O96006 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.29■□□□□ 0.36
ZBED1O96006 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.29■□□□□ 0.36
ZBED1O96006 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.29■□□□□ 0.36
ZBED1O96006 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 PCDH8P1-201ENST00000428983 2773 ntBASIC17.29■□□□□ 0.36
ZBED1O96006 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.29■□□□□ 0.36
ZBED1O96006 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.29■□□□□ 0.36
ZBED1O96006 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.29■□□□□ 0.36
ZBED1O96006 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZBED1O96006 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.28■□□□□ 0.36
ZBED1O96006 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.28■□□□□ 0.36
ZBED1O96006 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZBED1O96006 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms