Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CLPTM1O96005 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1O96005 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 KRT18P1-202ENST00000452408 1331 ntBASIC15.51■□□□□ 0.07
CLPTM1O96005 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1O96005 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPTM1O96005 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.51■□□□□ 0.07
CLPTM1O96005 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPTM1O96005 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1O96005 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CLPTM1O96005 AP002414.4-201ENST00000589764 1148 ntBASIC15.51■□□□□ 0.07
CLPTM1O96005 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
CLPTM1O96005 AC124864.1-201ENST00000623408 392 ntBASIC15.51■□□□□ 0.07
CLPTM1O96005 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 PCDHA3-202ENST00000532566 4594 ntBASIC15.51■□□□□ 0.07
CLPTM1O96005 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CLPTM1O96005 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLPTM1O96005 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 CDC14C-201ENST00000428251 1719 ntBASIC15.51■□□□□ 0.07
CLPTM1O96005 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPTM1O96005 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 LINC02447-202ENST00000501888 2146 ntBASIC15.5■□□□□ 0.07
CLPTM1O96005 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLPTM1O96005 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 MYCLP1-201ENST00000372451 1075 ntBASIC15.5■□□□□ 0.07
CLPTM1O96005 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 TSPY12P-201ENST00000421279 868 ntBASIC15.5■□□□□ 0.07
CLPTM1O96005 ATP5G2P1-201ENST00000433580 426 ntBASIC15.5■□□□□ 0.07
CLPTM1O96005 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.5■□□□□ 0.07
CLPTM1O96005 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.5■□□□□ 0.07
CLPTM1O96005 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLPTM1O96005 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 AC136621.1-201ENST00000624017 2304 ntBASIC15.5■□□□□ 0.07
CLPTM1O96005 AC007191.1-201ENST00000623179 2995 ntBASIC15.5■□□□□ 0.07
CLPTM1O96005 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPTM1O96005 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPTM1O96005 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms