Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TOP3BO95985 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP3BO95985 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.8■□□□□ 0.28
TOP3BO95985 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.8■□□□□ 0.28
TOP3BO95985 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
TOP3BO95985 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP3BO95985 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.8■□□□□ 0.28
TOP3BO95985 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP3BO95985 LINC02560-201ENST00000596379 459 ntBASIC16.8■□□□□ 0.28
TOP3BO95985 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 LINC00895-201ENST00000629028 1637 ntBASIC16.8■□□□□ 0.28
TOP3BO95985 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP3BO95985 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP3BO95985 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP3BO95985 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP3BO95985 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 CROCCP1-201ENST00000426910 5675 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 MIR943-201ENST00000401286 94 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 PTCHD3P3-201ENST00000403073 906 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.79■□□□□ 0.28
TOP3BO95985 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.79■□□□□ 0.28
TOP3BO95985 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 TIMM8BP1-201ENST00000452384 211 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 AC067863.1-201ENST00000494933 530 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.79■□□□□ 0.28
TOP3BO95985 AP002490.2-201ENST00000524791 560 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.79■□□□□ 0.28
TOP3BO95985 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
TOP3BO95985 AC015911.4-201ENST00000588022 1070 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.79■□□□□ 0.28
TOP3BO95985 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 AC007064.4-201ENST00000637740 555 ntBASIC16.79■□□□□ 0.28
TOP3BO95985 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP3BO95985 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
TOP3BO95985 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP3BO95985 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TOP3BO95985 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TOP3BO95985 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms