Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.16■□□□□ 0.02
CLIC3O95833 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.16■□□□□ 0.02
CLIC3O95833 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.16■□□□□ 0.02
CLIC3O95833 SIGLEC30P-201ENST00000455569 941 ntBASIC15.16■□□□□ 0.02
CLIC3O95833 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.16■□□□□ 0.02
CLIC3O95833 AC010331.1-201ENST00000611423 582 ntBASIC15.16■□□□□ 0.02
CLIC3O95833 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.16■□□□□ 0.02
CLIC3O95833 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.16■□□□□ 0.02
CLIC3O95833 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CLIC3O95833 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLIC3O95833 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.16■□□□□ 0.02
CLIC3O95833 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.16■□□□□ 0.02
CLIC3O95833 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.16■□□□□ 0.02
CLIC3O95833 KRT18P22-201ENST00000402024 1347 ntBASIC15.16■□□□□ 0.02
CLIC3O95833 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLIC3O95833 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.16■□□□□ 0.02
CLIC3O95833 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.15■□□□□ 0.02
CLIC3O95833 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.15■□□□□ 0.02
CLIC3O95833 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.15■□□□□ 0.02
CLIC3O95833 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.15■□□□□ 0.02
CLIC3O95833 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CLIC3O95833 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 MIR648-201ENST00000385046 94 ntBASIC15.15■□□□□ 0.02
CLIC3O95833 LINC00982-205ENST00000420957 435 ntBASIC15.15■□□□□ 0.02
CLIC3O95833 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.15■□□□□ 0.02
CLIC3O95833 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.15■□□□□ 0.02
CLIC3O95833 AC010203.1-204ENST00000548782 407 ntBASIC15.15■□□□□ 0.02
CLIC3O95833 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 AC011840.4-201ENST00000578471 627 ntBASIC15.15■□□□□ 0.02
CLIC3O95833 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 AC010654.1-201ENST00000615722 808 ntBASIC15.15■□□□□ 0.02
CLIC3O95833 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLIC3O95833 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
CLIC3O95833 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLIC3O95833 LINC00552-201ENST00000625151 2579 ntBASIC15.15■□□□□ 0.02
CLIC3O95833 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLIC3O95833 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.14■□□□□ 0.01
CLIC3O95833 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.14■□□□□ 0.01
CLIC3O95833 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.14■□□□□ 0.01
CLIC3O95833 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.14■□□□□ 0.01
CLIC3O95833 AL161772.1-201ENST00000610494 4412 ntBASIC15.14■□□□□ 0.01
CLIC3O95833 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.14■□□□□ 0.01
CLIC3O95833 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLIC3O95833 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLIC3O95833 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms