Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE6O95741 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE6O95741 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE6O95741 MIR6080-201ENST00000617359 66 ntBASIC16.08■□□□□ 0.16
CPNE6O95741 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE6O95741 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE6O95741 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CPNE6O95741 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE6O95741 AC092171.3-201ENST00000610122 2651 ntBASIC16.08■□□□□ 0.16
CPNE6O95741 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE6O95741 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE6O95741 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE6O95741 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 AC024909.3-201ENST00000611513 2257 ntBASIC16.07■□□□□ 0.16
CPNE6O95741 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CPNE6O95741 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.07■□□□□ 0.16
CPNE6O95741 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE6O95741 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE6O95741 MIR4492-201ENST00000581627 80 ntBASIC16.07■□□□□ 0.16
CPNE6O95741 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE6O95741 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CPNE6O95741 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CPNE6O95741 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE6O95741 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE6O95741 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CPNE6O95741 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE6O95741 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CPNE6O95741 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CPNE6O95741 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE6O95741 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
CPNE6O95741 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE6O95741 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CPNE6O95741 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE6O95741 COX20P2-201ENST00000452636 358 ntBASIC16.06■□□□□ 0.16
CPNE6O95741 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE6O95741 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE6O95741 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE6O95741 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE6O95741 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CPNE6O95741 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE6O95741 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE6O95741 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE6O95741 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CPNE6O95741 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CPNE6O95741 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE6O95741 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms