Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PEX1O43933 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PEX1O43933 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.03■□□□□ 0.16
PEX1O43933 AL020989.1-201ENST00000422979 469 ntBASIC16.03■□□□□ 0.16
PEX1O43933 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 KRT18P58-201ENST00000527480 1120 ntBASIC16.03■□□□□ 0.16
PEX1O43933 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.03■□□□□ 0.16
PEX1O43933 AC109462.3-201ENST00000573934 613 ntBASIC16.03■□□□□ 0.16
PEX1O43933 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.03■□□□□ 0.16
PEX1O43933 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.02■□□□□ 0.16
PEX1O43933 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.02■□□□□ 0.16
PEX1O43933 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 MYCLP1-201ENST00000372451 1075 ntBASIC16.02■□□□□ 0.16
PEX1O43933 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 AC098831.1-202ENST00000438821 336 ntBASIC16.02■□□□□ 0.16
PEX1O43933 IGHV3-22-201ENST00000520721 359 ntBASIC16.02■□□□□ 0.16
PEX1O43933 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.02■□□□□ 0.16
PEX1O43933 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.02■□□□□ 0.16
PEX1O43933 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.02■□□□□ 0.16
PEX1O43933 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.02■□□□□ 0.16
PEX1O43933 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PEX1O43933 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PEX1O43933 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.02■□□□□ 0.15
PEX1O43933 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
PEX1O43933 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.02■□□□□ 0.15
PEX1O43933 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 AC010491.1-201ENST00000563101 2797 ntBASIC16.02■□□□□ 0.15
PEX1O43933 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PEX1O43933 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PEX1O43933 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PEX1O43933 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PEX1O43933 AC132938.5-201ENST00000624980 1813 ntBASIC16.01■□□□□ 0.15
PEX1O43933 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PEX1O43933 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PEX1O43933 TUBB8P12-201ENST00000308911 1335 ntBASIC16.01■□□□□ 0.15
PEX1O43933 TUBB7P-202ENST00000428444 1305 ntBASIC16.01■□□□□ 0.15
PEX1O43933 TUBB8P7-204ENST00000567960 1332 ntBASIC16.01■□□□□ 0.15
PEX1O43933 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.01■□□□□ 0.15
PEX1O43933 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PEX1O43933 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PEX1O43933 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.01■□□□□ 0.15
PEX1O43933 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PEX1O43933 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PEX1O43933 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PEX1O43933 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.01■□□□□ 0.15
PEX1O43933 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PEX1O43933 AC003669.1-201ENST00000334569 611 ntBASIC16.01■□□□□ 0.15
PEX1O43933 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PEX1O43933 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PEX1O43933 KLF4P1-201ENST00000412782 1185 ntBASIC16.01■□□□□ 0.15
PEX1O43933 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.01■□□□□ 0.15
PEX1O43933 IGHV3-52-201ENST00000519770 353 ntBASIC16.01■□□□□ 0.15
PEX1O43933 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.01■□□□□ 0.15
PEX1O43933 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PEX1O43933 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.01■□□□□ 0.15
PEX1O43933 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.01■□□□□ 0.15
PEX1O43933 AC019129.2-201ENST00000609837 1235 ntBASIC16.01■□□□□ 0.15
PEX1O43933 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms