Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
UBE2D4Q9Y2X8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 TMPOP1-202ENST00000424642 1267 ntBASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 SLC25A6P2-201ENST00000497974 877 ntBASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 AC106795.1-205ENST00000512851 1056 ntBASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 AC139887.3-201ENST00000568585 713 ntBASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 AC023157.3-201ENST00000619086 2088 ntBASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.43□□□□□ -0.58
UBE2D4Q9Y2X8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms