Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.47■□□□□ 0.71
RTN4Q9NQC3 LINC00552-201ENST00000625151 2579 ntBASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 KRT89P-201ENST00000620027 1478 ntBASIC19.47■□□□□ 0.71
RTN4Q9NQC3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AC009090.5-201ENST00000624886 2285 ntBASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AC007292.2-201ENST00000593524 1812 ntBASIC19.46■□□□□ 0.71
RTN4Q9NQC3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 MMP23A-201ENST00000234610 1017 ntBASIC19.46■□□□□ 0.71
RTN4Q9NQC3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AC024563.2-201ENST00000603282 481 ntBASIC19.46■□□□□ 0.71
RTN4Q9NQC3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTN4Q9NQC3 LINC01230-201ENST00000625222 3017 ntBASIC19.46■□□□□ 0.71
RTN4Q9NQC3 AL356585.2-201ENST00000625078 2396 ntBASIC19.46■□□□□ 0.71
RTN4Q9NQC3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 AC025580.3-201ENST00000617932 1424 ntBASIC19.45■□□□□ 0.7
RTN4Q9NQC3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms