Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 KRT8P39-201ENST00000396270 1433 ntBASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.08□□□□□ -0.15
CMSS1Q9BQ75 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 AL512652.2-201ENST00000625156 1716 ntBASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 SNX33P1-201ENST00000592116 1762 ntBASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 AL031731.1-201ENST00000642131 2094 ntBASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CMSS1Q9BQ75 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 SNX18-202ENST00000343017 3140 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 KRT16P4-201ENST00000453883 522 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 AC132008.2-207ENST00000454517 770 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 MPDU1-223ENST00000582151 728 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 AL139424.1-201ENST00000607572 797 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 AC069148.1-201ENST00000608741 768 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 AP001269.4-201ENST00000609611 512 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 AL161772.1-201ENST00000610494 4412 ntBASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CMSS1Q9BQ75 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CMSS1Q9BQ75 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms