Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE1Q99829 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CPNE1Q99829 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CPNE1Q99829 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CPNE1Q99829 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE1Q99829 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE1Q99829 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE1Q99829 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE1Q99829 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE1Q99829 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE1Q99829 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.38■□□□□ 0.21
CPNE1Q99829 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CPNE1Q99829 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.37■□□□□ 0.21
CPNE1Q99829 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.37■□□□□ 0.21
CPNE1Q99829 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 AC092910.1-201ENST00000482027 1129 ntBASIC16.37■□□□□ 0.21
CPNE1Q99829 AC108751.1-201ENST00000490852 363 ntBASIC16.37■□□□□ 0.21
CPNE1Q99829 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.37■□□□□ 0.21
CPNE1Q99829 AC092919.2-201ENST00000623631 1645 ntBASIC16.37■□□□□ 0.21
CPNE1Q99829 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 AC126177.1-201ENST00000547829 2218 ntBASIC16.37■□□□□ 0.21
CPNE1Q99829 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CPNE1Q99829 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CPNE1Q99829 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CPNE1Q99829 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CPNE1Q99829 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 AC008677.1-201ENST00000519230 1561 ntBASIC16.36■□□□□ 0.21
CPNE1Q99829 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CPNE1Q99829 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CPNE1Q99829 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CPNE1Q99829 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.36■□□□□ 0.21
CPNE1Q99829 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CPNE1Q99829 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CPNE1Q99829 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.35■□□□□ 0.21
CPNE1Q99829 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE1Q99829 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.35■□□□□ 0.21
CPNE1Q99829 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE1Q99829 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CPNE1Q99829 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CPNE1Q99829 AC016027.1-202ENST00000607927 1699 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms