Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 GPAA1P2-202ENST00000606848 1787 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AL596257.1-201ENST00000641463 2694 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 TFAMP1-201ENST00000412727 736 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AP006288.1-201ENST00000446065 395 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 RARRES2P8-201ENST00000566335 367 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AP001160.2-201ENST00000596071 487 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AC105339.1-204ENST00000636249 355 ntBASIC19.01■□□□□ 0.63
PGBD1Q96JS3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PGBD1Q96JS3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 AC004461.1-201ENST00000412461 403 ntBASIC19■□□□□ 0.63
PGBD1Q96JS3 PMS2P4-201ENST00000412466 1052 ntBASIC19■□□□□ 0.63
PGBD1Q96JS3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19■□□□□ 0.63
PGBD1Q96JS3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 AC022145.2-201ENST00000598203 171 ntBASIC19■□□□□ 0.63
PGBD1Q96JS3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19■□□□□ 0.63
PGBD1Q96JS3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19■□□□□ 0.63
PGBD1Q96JS3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19■□□□□ 0.63
PGBD1Q96JS3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PGBD1Q96JS3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PGBD1Q96JS3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 ACTG1P14-201ENST00000446382 1122 ntBASIC18.99■□□□□ 0.63
PGBD1Q96JS3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms