Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC084121.4-201ENST00000641598 221 ntBASIC14.73□□□□□ -0.05
CPNE4Q96A23 AF228730.8-201ENST00000642140 221 ntBASIC14.73□□□□□ -0.05
CPNE4Q96A23 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.72□□□□□ -0.05
CPNE4Q96A23 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 MIR346-201ENST00000362234 95 ntBASIC14.72□□□□□ -0.05
CPNE4Q96A23 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 AC093724.1-201ENST00000448659 1027 ntBASIC14.72□□□□□ -0.05
CPNE4Q96A23 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.72□□□□□ -0.05
CPNE4Q96A23 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.72□□□□□ -0.05
CPNE4Q96A23 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CPNE4Q96A23 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 AL138918.1-201ENST00000568306 659 ntBASIC14.71□□□□□ -0.05
CPNE4Q96A23 AC027612.4-201ENST00000605371 583 ntBASIC14.71□□□□□ -0.05
CPNE4Q96A23 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CPNE4Q96A23 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CPNE4Q96A23 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms