Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP13Q92995 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP13Q92995 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.14■□□□□ 0.34
USP13Q92995 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.14■□□□□ 0.34
USP13Q92995 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
USP13Q92995 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
USP13Q92995 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
USP13Q92995 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
USP13Q92995 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 HLA-H-201ENST00000383620 1096 ntBASIC17.14■□□□□ 0.33
USP13Q92995 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 FAM207CP-201ENST00000443486 507 ntBASIC17.14■□□□□ 0.33
USP13Q92995 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 AC004890.2-204ENST00000481968 304 ntBASIC17.14■□□□□ 0.33
USP13Q92995 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.14■□□□□ 0.33
USP13Q92995 AC190387.1-201ENST00000551683 408 ntBASIC17.14■□□□□ 0.33
USP13Q92995 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 AC008761.3-201ENST00000624803 892 ntBASIC17.14■□□□□ 0.33
USP13Q92995 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.14■□□□□ 0.33
USP13Q92995 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.14■□□□□ 0.33
USP13Q92995 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
USP13Q92995 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP13Q92995 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP13Q92995 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP13Q92995 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
USP13Q92995 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
USP13Q92995 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.13■□□□□ 0.33
USP13Q92995 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.13■□□□□ 0.33
USP13Q92995 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
USP13Q92995 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 SPTSSB-204ENST00000617024 1292 ntBASIC17.13■□□□□ 0.33
USP13Q92995 SPDYE12P-201ENST00000618416 771 ntBASIC17.13■□□□□ 0.33
USP13Q92995 AL590560.3-201ENST00000623350 461 ntBASIC17.13■□□□□ 0.33
USP13Q92995 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP13Q92995 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.13■□□□□ 0.33
USP13Q92995 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
USP13Q92995 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.12■□□□□ 0.33
USP13Q92995 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
USP13Q92995 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP13Q92995 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms