Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH19Q8TAB3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 CDC14C-201ENST00000428251 1719 ntBASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 AL589702.1-201ENST00000641229 1509 ntBASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 AC211486.1-202ENST00000416371 468 ntBASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 FAM58CP-201ENST00000435741 640 ntBASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 AC211476.1-201ENST00000503899 468 ntBASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 PRYP6-201ENST00000514804 343 ntBASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH19Q8TAB3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 CICP6-201ENST00000457191 2729 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 LINC02447-202ENST00000501888 2146 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AC112504.1-201ENST00000623415 1841 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 MIR648-201ENST00000385046 94 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AL355306.1-201ENST00000415580 579 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 DNAJB3-202ENST00000449667 1266 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AC005829.1-201ENST00000570002 483 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AC069224.1-201ENST00000566372 1715 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 AC132872.4-202ENST00000622924 2756 ntBASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCDH19Q8TAB3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms