Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 BASP1P1-201ENST00000430708 665 ntBASIC16.39■□□□□ 0.21
LSMEM2Q8N112 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.39■□□□□ 0.21
LSMEM2Q8N112 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.39■□□□□ 0.21
LSMEM2Q8N112 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AL031731.1-201ENST00000642131 2094 ntBASIC16.38■□□□□ 0.21
LSMEM2Q8N112 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AL627223.1-201ENST00000416693 442 ntBASIC16.38■□□□□ 0.21
LSMEM2Q8N112 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 TIMM8BP1-201ENST00000452384 211 ntBASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AC093214.1-201ENST00000511688 1107 ntBASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AC129492.6-201ENST00000611383 1305 ntBASIC16.38■□□□□ 0.21
LSMEM2Q8N112 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LSMEM2Q8N112 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 AL671277.1-201ENST00000429656 993 ntBASIC16.37■□□□□ 0.21
LSMEM2Q8N112 AC005237.2-201ENST00000434368 219 ntBASIC16.37■□□□□ 0.21
LSMEM2Q8N112 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 SPDYE11-202ENST00000450699 704 ntBASIC16.37■□□□□ 0.21
LSMEM2Q8N112 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 SPDYE9P-201ENST00000570642 692 ntBASIC16.37■□□□□ 0.21
LSMEM2Q8N112 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 SPDYE10P-202ENST00000612005 668 ntBASIC16.37■□□□□ 0.21
LSMEM2Q8N112 SPDYE8P-202ENST00000612377 668 ntBASIC16.37■□□□□ 0.21
LSMEM2Q8N112 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LSMEM2Q8N112 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms