Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 SPDYE12P-201ENST00000618416 771 ntBASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCN4BQ8IWT1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 AC105021.1-202ENST00000570572 669 ntBASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 RN7SL828P-201ENST00000607615 303 ntBASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SCN4BQ8IWT1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 AC005052.1-201ENST00000625181 2492 ntBASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 AL035456.1-201ENST00000456064 1369 ntBASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCN4BQ8IWT1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms