Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 AL355877.3-201ENST00000622820 899 ntBASIC14.86□□□□□ -0.03
SHFQ7M4L6 AC112504.1-201ENST00000623415 1841 ntBASIC14.86□□□□□ -0.03
SHFQ7M4L6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.86□□□□□ -0.03
SHFQ7M4L6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHFQ7M4L6 GPAA1P2-202ENST00000606848 1787 ntBASIC14.85□□□□□ -0.03
SHFQ7M4L6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 SCARNA2-201ENST00000458748 420 ntBASIC14.85□□□□□ -0.03
SHFQ7M4L6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 LINC02228-204ENST00000642115 2962 ntBASIC14.85□□□□□ -0.03
SHFQ7M4L6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.85□□□□□ -0.03
SHFQ7M4L6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHFQ7M4L6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.84□□□□□ -0.03
SHFQ7M4L6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 AC004706.3-202ENST00000621574 984 ntBASIC14.84□□□□□ -0.03
SHFQ7M4L6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHFQ7M4L6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHFQ7M4L6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms