Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 AL121894.2-201ENST00000602977 491 ntBASIC18.44■□□□□ 0.54
SHC4Q6S5L8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SHC4Q6S5L8 AL589702.1-201ENST00000641229 1509 ntBASIC18.44■□□□□ 0.54
SHC4Q6S5L8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 HYMAI-201ENST00000635591 3347 ntBASIC18.43■□□□□ 0.54
SHC4Q6S5L8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 AP002472.1-201ENST00000577490 586 ntBASIC18.43■□□□□ 0.54
SHC4Q6S5L8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 AC092865.6-201ENST00000642101 219 ntBASIC18.43■□□□□ 0.54
SHC4Q6S5L8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SHC4Q6S5L8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 PDPK2P-202ENST00000562415 1191 ntBASIC18.42■□□□□ 0.54
SHC4Q6S5L8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 AC002347.1-201ENST00000569543 541 ntBASIC18.42■□□□□ 0.54
SHC4Q6S5L8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SHC4Q6S5L8 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 WASH6P-202ENST00000359512 1437 ntBASIC18.41■□□□□ 0.54
SHC4Q6S5L8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 AC099522.2-201ENST00000607001 744 ntBASIC18.41■□□□□ 0.54
SHC4Q6S5L8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 AP003680.1-201ENST00000598970 3660 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms