Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC027796.2-201ENST00000575326 344 ntBASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 AC009093.7-201ENST00000623853 1223 ntBASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 AC008267.7-201ENST00000624570 1194 ntBASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 AL031731.1-201ENST00000642131 2094 ntBASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 LINC00628-201ENST00000628516 1289 ntBASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.09■□□□□ 0.33
RFWD3Q6PCD5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFWD3Q6PCD5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AC006538.1-201ENST00000567905 1585 ntBASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 HLA-J-203ENST00000494367 1087 ntBASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 SLC25A39P2-201ENST00000537614 270 ntBASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFWD3Q6PCD5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.07■□□□□ 0.32
RFWD3Q6PCD5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms