Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 AC006001.1-201ENST00000325130 474 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 MIR33B-201ENST00000385104 96 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 FAM197Y7-201ENST00000432892 766 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 AC078819.1-201ENST00000547454 765 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 AC012085.1-201ENST00000548270 765 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 MIR3619-201ENST00000579667 83 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 AC020763.4-201ENST00000623414 4170 ntBASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.24■□□□□ 0.35
C9orf50Q5SZB4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AL138688.1-201ENST00000624851 1594 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AC092978.1-202ENST00000637590 1327 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 RPSAP36-202ENST00000494591 1261 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AC025279.2-201ENST00000569730 653 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 MIR7845-201ENST00000618396 99 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
C9orf50Q5SZB4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 AC018735.1-201ENST00000437208 1502 ntBASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 GGT4P-201ENST00000623672 1708 ntBASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 TOMM22P5-201ENST00000416399 439 ntBASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 MTX1P1-201ENST00000440904 838 ntBASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 AC022137.2-201ENST00000503482 481 ntBASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.22■□□□□ 0.35
C9orf50Q5SZB4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms