Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.57□□□□□ -0.08
ODF4Q2M2E3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ODF4Q2M2E3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 AC006504.4-201ENST00000592118 1568 ntBASIC14.56□□□□□ -0.08
ODF4Q2M2E3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 HCG4P8-203ENST00000443049 980 ntBASIC14.56□□□□□ -0.08
ODF4Q2M2E3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SLC25A6P2-201ENST00000497974 877 ntBASIC14.56□□□□□ -0.08
ODF4Q2M2E3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 MIR4492-201ENST00000581627 80 ntBASIC14.56□□□□□ -0.08
ODF4Q2M2E3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 AC004706.3-202ENST00000621574 984 ntBASIC14.56□□□□□ -0.08
ODF4Q2M2E3 AL355877.3-201ENST00000622820 899 ntBASIC14.56□□□□□ -0.08
ODF4Q2M2E3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.56□□□□□ -0.08
ODF4Q2M2E3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 SLC22A20-204ENST00000530038 1673 ntBASIC14.55□□□□□ -0.08
ODF4Q2M2E3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 ELK2BP-201ENST00000415014 1224 ntBASIC14.55□□□□□ -0.08
ODF4Q2M2E3 UPK3BP1-201ENST00000428678 509 ntBASIC14.55□□□□□ -0.08
ODF4Q2M2E3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 FGFR3P6-201ENST00000457012 610 ntBASIC14.55□□□□□ -0.08
ODF4Q2M2E3 KRT18P31-201ENST00000506277 1292 ntBASIC14.55□□□□□ -0.08
ODF4Q2M2E3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ODF4Q2M2E3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.55□□□□□ -0.08
ODF4Q2M2E3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms