Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 TISP43-201ENST00000409793 538 ntTSL 4 BASIC21.53■■□□□ 1.04
COL16A1Q07092 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC21.53■■□□□ 1.04
COL16A1Q07092 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC21.53■■□□□ 1.04
COL16A1Q07092 AC245100.5-201ENST00000452108 331 ntBASIC21.53■■□□□ 1.04
COL16A1Q07092 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.53■■□□□ 1.04
COL16A1Q07092 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.53■■□□□ 1.04
COL16A1Q07092 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COL16A1Q07092 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.53■■□□□ 1.04
COL16A1Q07092 AL121723.1-201ENST00000445194 1519 ntBASIC21.53■■□□□ 1.04
COL16A1Q07092 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.53■■□□□ 1.04
COL16A1Q07092 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL16A1Q07092 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC21.53■■□□□ 1.04
COL16A1Q07092 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL16A1Q07092 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
COL16A1Q07092 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC21.52■■□□□ 1.04
COL16A1Q07092 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC21.52■■□□□ 1.04
COL16A1Q07092 AC005730.2-201ENST00000564549 1184 ntBASIC21.52■■□□□ 1.04
COL16A1Q07092 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL16A1Q07092 AL691432.1-201ENST00000596308 1422 ntBASIC21.52■■□□□ 1.04
COL16A1Q07092 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.52■■□□□ 1.03
COL16A1Q07092 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.51■■□□□ 1.03
COL16A1Q07092 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL16A1Q07092 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COL16A1Q07092 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 RNA5SP486-201ENST00000515961 83 ntBASIC21.51■■□□□ 1.03
COL16A1Q07092 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.51■■□□□ 1.03
COL16A1Q07092 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
COL16A1Q07092 AC011491.1-203ENST00000637688 543 ntBASIC21.51■■□□□ 1.03
COL16A1Q07092 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.51■■□□□ 1.03
COL16A1Q07092 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL16A1Q07092 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.51■■□□□ 1.03
COL16A1Q07092 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL16A1Q07092 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.51■■□□□ 1.03
COL16A1Q07092 MIR3147-201ENST00000577811 66 ntBASIC21.51■■□□□ 1.03
COL16A1Q07092 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COL16A1Q07092 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL16A1Q07092 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC21.5■■□□□ 1.03
COL16A1Q07092 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
COL16A1Q07092 CFL1-206ENST00000527344 962 ntTSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC21.5■■□□□ 1.03
COL16A1Q07092 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC21.5■■□□□ 1.03
COL16A1Q07092 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.5■■□□□ 1.03
COL16A1Q07092 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms