Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
EFNB1P98172 AL121772.3-201ENST00000610840 674 ntBASIC14.62□□□□□ -0.07
EFNB1P98172 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
EFNB1P98172 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
EFNB1P98172 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
EFNB1P98172 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
EFNB1P98172 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNB1P98172 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNB1P98172 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
EFNB1P98172 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNB1P98172 AL136379.1-201ENST00000623471 2642 ntBASIC14.62□□□□□ -0.07
EFNB1P98172 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.61□□□□□ -0.07
EFNB1P98172 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 AF238378.1-201ENST00000526806 358 ntBASIC14.61□□□□□ -0.07
EFNB1P98172 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.61□□□□□ -0.07
EFNB1P98172 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.61□□□□□ -0.07
EFNB1P98172 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.61□□□□□ -0.07
EFNB1P98172 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
EFNB1P98172 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNB1P98172 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
EFNB1P98172 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.61□□□□□ -0.07
EFNB1P98172 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNB1P98172 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
EFNB1P98172 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNB1P98172 AC112693.3-201ENST00000624819 1983 ntBASIC14.6□□□□□ -0.07
EFNB1P98172 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.6□□□□□ -0.07
EFNB1P98172 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
EFNB1P98172 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
EFNB1P98172 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.6□□□□□ -0.07
EFNB1P98172 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
EFNB1P98172 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.6□□□□□ -0.07
EFNB1P98172 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.6□□□□□ -0.07
EFNB1P98172 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
EFNB1P98172 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms