Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX1P83916 AC008040.2-201ENST00000461049 708 ntBASIC17.15■□□□□ 0.34
CBX1P83916 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CBX1P83916 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CBX1P83916 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 AL445675.2-201ENST00000620291 557 ntBASIC17.15■□□□□ 0.34
CBX1P83916 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.15■□□□□ 0.34
CBX1P83916 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX1P83916 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.15■□□□□ 0.34
CBX1P83916 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.15■□□□□ 0.34
CBX1P83916 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.15■□□□□ 0.34
CBX1P83916 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX1P83916 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
CBX1P83916 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CBX1P83916 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
CBX1P83916 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX1P83916 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX1P83916 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX1P83916 CDCA4P2-201ENST00000441182 718 ntBASIC17.14■□□□□ 0.33
CBX1P83916 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX1P83916 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.14■□□□□ 0.33
CBX1P83916 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.14■□□□□ 0.33
CBX1P83916 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CBX1P83916 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.14■□□□□ 0.33
CBX1P83916 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CBX1P83916 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX1P83916 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX1P83916 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBX1P83916 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CBX1P83916 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX1P83916 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CBX1P83916 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX1P83916 ID1-201ENST00000376105 1233 ntBASIC17.13■□□□□ 0.33
CBX1P83916 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.13■□□□□ 0.33
CBX1P83916 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CBX1P83916 AC026185.1-201ENST00000445748 174 ntBASIC17.13■□□□□ 0.33
CBX1P83916 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX1P83916 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX1P83916 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.13■□□□□ 0.33
CBX1P83916 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX1P83916 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX1P83916 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CBX1P83916 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBX1P83916 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX1P83916 LINC00895-201ENST00000629028 1637 ntBASIC17.13■□□□□ 0.33
CBX1P83916 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms