Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HIST1H2BDP58876 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 AC105206.1-202ENST00000314927 2368 ntBASIC12.32□□□□□ -0.44
HIST1H2BDP58876 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.32□□□□□ -0.44
HIST1H2BDP58876 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 KRT18P29-201ENST00000397031 1267 ntBASIC12.32□□□□□ -0.44
HIST1H2BDP58876 AC096631.2-201ENST00000436136 790 ntBASIC12.32□□□□□ -0.44
HIST1H2BDP58876 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
HIST1H2BDP58876 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HIST1H2BDP58876 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms