Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.08■□□□□ 0
CDH11P55287 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDH11P55287 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 GGT4P-201ENST00000623672 1708 ntBASIC15.08■□□□□ 0
CDH11P55287 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDH11P55287 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.08■□□□□ 0
CDH11P55287 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CDH11P55287 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDH11P55287 AC006449.6-201ENST00000612330 2296 ntBASIC15.08■□□□□ 0
CDH11P55287 AL671710.1-201ENST00000610245 2349 ntBASIC15.08■□□□□ 0
CDH11P55287 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH11P55287 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH11P55287 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDH11P55287 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.07■□□□□ 0
CDH11P55287 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.07■□□□□ 0
CDH11P55287 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDH11P55287 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.07■□□□□ 0
CDH11P55287 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.07■□□□□ 0
CDH11P55287 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.07■□□□□ 0
CDH11P55287 AL591424.1-201ENST00000442569 1213 ntBASIC15.07■□□□□ 0
CDH11P55287 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.07■□□□□ 0
CDH11P55287 UNC93B6-202ENST00000528242 690 ntBASIC15.07■□□□□ 0
CDH11P55287 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.07■□□□□ 0
CDH11P55287 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.07■□□□□ 0
CDH11P55287 AC034105.1-201ENST00000563488 319 ntBASIC15.07■□□□□ 0
CDH11P55287 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.07■□□□□ 0
CDH11P55287 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
CDH11P55287 AL589182.2-201ENST00000619332 1049 ntBASIC15.07■□□□□ 0
CDH11P55287 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.07■□□□□ 0
CDH11P55287 PGM5P2-202ENST00000637225 1043 ntBASIC15.07■□□□□ 0
CDH11P55287 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CDH11P55287 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.07■□□□□ 0
CDH11P55287 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.07■□□□□ 0
CDH11P55287 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.07■□□□□ 0
CDH11P55287 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH11P55287 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.07■□□□□ 0
CDH11P55287 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 NCF1C-201ENST00000438382 1427 ntBASIC15.07■□□□□ 0
CDH11P55287 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CDH11P55287 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.07■□□□□ 0
CDH11P55287 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH11P55287 AC010491.1-201ENST00000563101 2797 ntBASIC15.07■□□□□ 0
CDH11P55287 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH11P55287 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH11P55287 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.06■□□□□ 0
CDH11P55287 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDH11P55287 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH11P55287 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.06■□□□□ 0
CDH11P55287 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.06■□□□□ 0
CDH11P55287 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.06■□□□□ 0
CDH11P55287 FAM197Y3-203ENST00000618346 717 ntBASIC15.06■□□□□ 0
CDH11P55287 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.06■□□□□ 0
CDH11P55287 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.06■□□□□ 0
CDH11P55287 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH11P55287 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH11P55287 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms