Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CDH8P55286 PMS2P2-201ENST00000425039 1128 ntBASIC17.44■□□□□ 0.38
CDH8P55286 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH8P55286 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH8P55286 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH8P55286 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH8P55286 AP001059.3-201ENST00000619053 235 ntBASIC17.44■□□□□ 0.38
CDH8P55286 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH8P55286 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH8P55286 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH8P55286 AC008677.1-201ENST00000519230 1561 ntBASIC17.44■□□□□ 0.38
CDH8P55286 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH8P55286 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH8P55286 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 LINC02199-201ENST00000506655 2702 ntBASIC17.43■□□□□ 0.38
CDH8P55286 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 FAM220BP-201ENST00000377689 816 ntBASIC17.43■□□□□ 0.38
CDH8P55286 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH8P55286 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH8P55286 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH8P55286 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH8P55286 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH8P55286 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CDH8P55286 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH8P55286 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH8P55286 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH8P55286 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 AC006449.6-201ENST00000612330 2296 ntBASIC17.42■□□□□ 0.38
CDH8P55286 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH8P55286 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH8P55286 HLA-H-201ENST00000383620 1096 ntBASIC17.42■□□□□ 0.38
CDH8P55286 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 AC061975.2-201ENST00000581722 295 ntBASIC17.42■□□□□ 0.38
CDH8P55286 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 Z92544.3-201ENST00000624747 417 ntBASIC17.42■□□□□ 0.38
CDH8P55286 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH8P55286 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH8P55286 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH8P55286 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH8P55286 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms