Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.99□□□□□ -0.49
APOC4P55056 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC4P55056 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 CETN4P-206ENST00000642099 2168 ntBASIC11.98□□□□□ -0.49
APOC4P55056 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
APOC4P55056 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC4P55056 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 GGT4P-201ENST00000623672 1708 ntBASIC11.98□□□□□ -0.49
APOC4P55056 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
APOC4P55056 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
APOC4P55056 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC4P55056 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 FO538757.1-201ENST00000623083 1397 ntBASIC11.98□□□□□ -0.49
APOC4P55056 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC4P55056 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.98□□□□□ -0.49
APOC4P55056 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.98□□□□□ -0.49
APOC4P55056 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.98□□□□□ -0.49
APOC4P55056 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 POU5F1P6-201ENST00000466990 990 ntBASIC11.98□□□□□ -0.49
APOC4P55056 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.98□□□□□ -0.49
APOC4P55056 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC4P55056 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 SPCS2P1-201ENST00000561636 679 ntBASIC11.98□□□□□ -0.49
APOC4P55056 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC4P55056 MIR3197-201ENST00000582241 73 ntBASIC11.98□□□□□ -0.49
APOC4P55056 AC005498.2-205ENST00000593218 784 ntBASIC11.98□□□□□ -0.49
APOC4P55056 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
APOC4P55056 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.98□□□□□ -0.49
APOC4P55056 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.98□□□□□ -0.49
APOC4P55056 AJ011932.1-201ENST00000621707 465 ntBASIC11.98□□□□□ -0.49
APOC4P55056 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
APOC4P55056 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
APOC4P55056 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
APOC4P55056 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.97□□□□□ -0.49
APOC4P55056 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
APOC4P55056 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.97□□□□□ -0.49
APOC4P55056 AL589702.1-201ENST00000641229 1509 ntBASIC11.97□□□□□ -0.49
APOC4P55056 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
APOC4P55056 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
APOC4P55056 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 380.3 ms