Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
FNTAP49354 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FNTAP49354 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.05■□□□□ 0.32
FNTAP49354 RPS15P9-201ENST00000494093 319 ntBASIC17.05■□□□□ 0.32
FNTAP49354 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.05■□□□□ 0.32
FNTAP49354 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FNTAP49354 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.05■□□□□ 0.32
FNTAP49354 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FNTAP49354 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.05■□□□□ 0.32
FNTAP49354 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.04■□□□□ 0.32
FNTAP49354 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FNTAP49354 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.04■□□□□ 0.32
FNTAP49354 AC005622.1-201ENST00000636801 1703 ntBASIC17.04■□□□□ 0.32
FNTAP49354 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.04■□□□□ 0.32
FNTAP49354 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.04■□□□□ 0.32
FNTAP49354 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 AC016027.1-202ENST00000607927 1699 ntBASIC17.04■□□□□ 0.32
FNTAP49354 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.04■□□□□ 0.32
FNTAP49354 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.04■□□□□ 0.32
FNTAP49354 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.04■□□□□ 0.32
FNTAP49354 KRT18P31-201ENST00000506277 1292 ntBASIC17.04■□□□□ 0.32
FNTAP49354 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FNTAP49354 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.04■□□□□ 0.32
FNTAP49354 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.04■□□□□ 0.32
FNTAP49354 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.04■□□□□ 0.32
FNTAP49354 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.04■□□□□ 0.32
FNTAP49354 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.04■□□□□ 0.32
FNTAP49354 AL121772.3-201ENST00000610840 674 ntBASIC17.04■□□□□ 0.32
FNTAP49354 AC107918.4-202ENST00000641623 219 ntBASIC17.04■□□□□ 0.32
FNTAP49354 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FNTAP49354 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FNTAP49354 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.04■□□□□ 0.32
FNTAP49354 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FNTAP49354 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FNTAP49354 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FNTAP49354 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.03■□□□□ 0.32
FNTAP49354 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.03■□□□□ 0.32
FNTAP49354 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FNTAP49354 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
FNTAP49354 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.03■□□□□ 0.32
FNTAP49354 KRT18P27-201ENST00000427733 1299 ntBASIC17.03■□□□□ 0.32
FNTAP49354 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.03■□□□□ 0.32
FNTAP49354 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.03■□□□□ 0.32
FNTAP49354 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.03■□□□□ 0.32
FNTAP49354 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.03■□□□□ 0.32
FNTAP49354 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.03■□□□□ 0.32
FNTAP49354 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.03■□□□□ 0.32
FNTAP49354 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.03■□□□□ 0.32
FNTAP49354 REXO1L6P-202ENST00000619970 1078 ntBASIC17.03■□□□□ 0.32
FNTAP49354 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.03■□□□□ 0.32
FNTAP49354 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FNTAP49354 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms