Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
USP8P40818 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
USP8P40818 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP8P40818 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP8P40818 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.93■□□□□ 0.46
USP8P40818 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
USP8P40818 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.93■□□□□ 0.46
USP8P40818 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.93■□□□□ 0.46
USP8P40818 AC012569.1-201ENST00000591191 1524 ntBASIC17.93■□□□□ 0.46
USP8P40818 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.93■□□□□ 0.46
USP8P40818 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 AL031731.1-201ENST00000642131 2094 ntBASIC17.92■□□□□ 0.46
USP8P40818 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
USP8P40818 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
USP8P40818 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.92■□□□□ 0.46
USP8P40818 HCG4-201ENST00000418983 998 ntBASIC17.92■□□□□ 0.46
USP8P40818 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.92■□□□□ 0.46
USP8P40818 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.92■□□□□ 0.46
USP8P40818 FAM185BP-201ENST00000443595 716 ntBASIC17.92■□□□□ 0.46
USP8P40818 AL513480.1-201ENST00000451731 511 ntBASIC17.92■□□□□ 0.46
USP8P40818 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 CXCL1P1-201ENST00000502804 216 ntBASIC17.92■□□□□ 0.46
USP8P40818 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.92■□□□□ 0.46
USP8P40818 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.92■□□□□ 0.46
USP8P40818 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.92■□□□□ 0.46
USP8P40818 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.92■□□□□ 0.46
USP8P40818 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.92■□□□□ 0.46
USP8P40818 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
USP8P40818 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
USP8P40818 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP8P40818 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.92■□□□□ 0.46
USP8P40818 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.91■□□□□ 0.46
USP8P40818 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
USP8P40818 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
USP8P40818 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.91■□□□□ 0.46
USP8P40818 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 PRSS29P-201ENST00000440800 595 ntBASIC17.91■□□□□ 0.46
USP8P40818 VN2R19P-201ENST00000442399 1052 ntBASIC17.91■□□□□ 0.46
USP8P40818 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.91■□□□□ 0.46
USP8P40818 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.91■□□□□ 0.46
USP8P40818 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 ACTL9-202ENST00000612068 1252 ntBASIC17.91■□□□□ 0.46
USP8P40818 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.91■□□□□ 0.46
USP8P40818 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
USP8P40818 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP8P40818 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 AC007950.2-201ENST00000615045 2347 ntBASIC17.9■□□□□ 0.46
USP8P40818 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.9■□□□□ 0.46
USP8P40818 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.9■□□□□ 0.46
USP8P40818 IGHV3-22-201ENST00000520721 359 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms