Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KRT20P35900 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
KRT20P35900 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT20P35900 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
KRT20P35900 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
KRT20P35900 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.64■□□□□ 0.09
KRT20P35900 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.64■□□□□ 0.09
KRT20P35900 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
KRT20P35900 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT20P35900 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.64■□□□□ 0.09
KRT20P35900 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT20P35900 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
KRT20P35900 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
KRT20P35900 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
KRT20P35900 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT20P35900 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
KRT20P35900 AL391256.1-201ENST00000443260 1855 ntBASIC15.63■□□□□ 0.09
KRT20P35900 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.63■□□□□ 0.09
KRT20P35900 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 SLC25A6P2-201ENST00000497974 877 ntBASIC15.63■□□□□ 0.09
KRT20P35900 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
KRT20P35900 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 AP001350.2-201ENST00000625104 1094 ntBASIC15.63■□□□□ 0.09
KRT20P35900 AC005052.1-201ENST00000625181 2492 ntBASIC15.63■□□□□ 0.09
KRT20P35900 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.63■□□□□ 0.09
KRT20P35900 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT20P35900 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.63■□□□□ 0.09
KRT20P35900 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT20P35900 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT20P35900 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 AC023824.1-201ENST00000562945 2975 ntBASIC15.62■□□□□ 0.09
KRT20P35900 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT20P35900 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT20P35900 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
KRT20P35900 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
KRT20P35900 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 VN2R19P-201ENST00000442399 1052 ntBASIC15.62■□□□□ 0.09
KRT20P35900 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT20P35900 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 AC145285.3-201ENST00000564603 959 ntBASIC15.62■□□□□ 0.09
KRT20P35900 AC091167.2-201ENST00000579581 588 ntBASIC15.62■□□□□ 0.09
KRT20P35900 AC005412.3-201ENST00000580309 715 ntBASIC15.62■□□□□ 0.09
KRT20P35900 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.62■□□□□ 0.09
KRT20P35900 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
KRT20P35900 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KRT20P35900 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.62■□□□□ 0.09
KRT20P35900 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.62■□□□□ 0.09
KRT20P35900 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms