Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN7P35236 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PTPN7P35236 AC132872.4-202ENST00000622924 2756 ntBASIC16.91■□□□□ 0.3
PTPN7P35236 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PTPN7P35236 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN7P35236 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.91■□□□□ 0.3
PTPN7P35236 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN7P35236 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN7P35236 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 AC073439.1-201ENST00000624121 1774 ntBASIC16.91■□□□□ 0.3
PTPN7P35236 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN7P35236 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN7P35236 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTPN7P35236 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN7P35236 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN7P35236 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTPN7P35236 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN7P35236 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN7P35236 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN7P35236 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN7P35236 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.9■□□□□ 0.3
PTPN7P35236 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PTPN7P35236 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN7P35236 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
PTPN7P35236 AC002347.1-201ENST00000569543 541 ntBASIC16.9■□□□□ 0.3
PTPN7P35236 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN7P35236 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN7P35236 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN7P35236 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPN7P35236 AL589702.1-201ENST00000641229 1509 ntBASIC16.9■□□□□ 0.3
PTPN7P35236 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN7P35236 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 AC104640.1-201ENST00000562617 2109 ntBASIC16.9■□□□□ 0.3
PTPN7P35236 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN7P35236 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN7P35236 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
PTPN7P35236 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN7P35236 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN7P35236 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN7P35236 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.89■□□□□ 0.29
PTPN7P35236 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN7P35236 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.89■□□□□ 0.29
PTPN7P35236 AC034105.1-201ENST00000563488 319 ntBASIC16.89■□□□□ 0.29
PTPN7P35236 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.89■□□□□ 0.29
PTPN7P35236 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms