Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL603832.2-201ENST00000566195 2125 ntBASIC16.66■□□□□ 0.26
NFKB1P19838 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NFKB1P19838 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NFKB1P19838 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.66■□□□□ 0.26
NFKB1P19838 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.66■□□□□ 0.26
NFKB1P19838 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NFKB1P19838 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NFKB1P19838 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NFKB1P19838 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.65■□□□□ 0.26
NFKB1P19838 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.65■□□□□ 0.26
NFKB1P19838 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NFKB1P19838 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 PRYP6-201ENST00000514804 343 ntBASIC16.65■□□□□ 0.26
NFKB1P19838 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.65■□□□□ 0.26
NFKB1P19838 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NFKB1P19838 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NFKB1P19838 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFKB1P19838 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.65■□□□□ 0.26
NFKB1P19838 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
NFKB1P19838 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.26
NFKB1P19838 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NFKB1P19838 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.64■□□□□ 0.25
NFKB1P19838 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.64■□□□□ 0.25
NFKB1P19838 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
NFKB1P19838 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NFKB1P19838 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.64■□□□□ 0.25
NFKB1P19838 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.64■□□□□ 0.25
NFKB1P19838 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.64■□□□□ 0.25
NFKB1P19838 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 AL355306.1-201ENST00000415580 579 ntBASIC16.64■□□□□ 0.25
NFKB1P19838 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.64■□□□□ 0.25
NFKB1P19838 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.64■□□□□ 0.25
NFKB1P19838 AL138918.1-201ENST00000568306 659 ntBASIC16.64■□□□□ 0.25
NFKB1P19838 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.64■□□□□ 0.25
NFKB1P19838 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.64■□□□□ 0.25
NFKB1P19838 AC092902.6-201ENST00000641783 218 ntBASIC16.64■□□□□ 0.25
NFKB1P19838 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NFKB1P19838 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 AC010491.1-201ENST00000563101 2797 ntBASIC16.64■□□□□ 0.25
NFKB1P19838 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.64■□□□□ 0.25
NFKB1P19838 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.64■□□□□ 0.25
NFKB1P19838 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFKB1P19838 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NFKB1P19838 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.63■□□□□ 0.25
NFKB1P19838 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NFKB1P19838 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms