Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRAFP15056 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.92■□□□□ 0.3
BRAFP15056 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
BRAFP15056 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
BRAFP15056 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.91■□□□□ 0.3
BRAFP15056 GGT4P-201ENST00000623672 1708 ntBASIC16.91■□□□□ 0.3
BRAFP15056 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 MIR574-201ENST00000385209 96 ntBASIC16.91■□□□□ 0.3
BRAFP15056 UNC93B6-202ENST00000528242 690 ntBASIC16.91■□□□□ 0.3
BRAFP15056 AC034105.1-201ENST00000563488 319 ntBASIC16.91■□□□□ 0.3
BRAFP15056 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BRAFP15056 MIR1199-201ENST00000621445 119 ntBASIC16.91■□□□□ 0.3
BRAFP15056 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 AL139011.1-202ENST00000642063 584 ntBASIC16.91■□□□□ 0.3
BRAFP15056 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.91■□□□□ 0.3
BRAFP15056 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRAFP15056 GGT3P-204ENST00000453783 1664 ntBASIC16.91■□□□□ 0.3
BRAFP15056 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRAFP15056 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BRAFP15056 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.9■□□□□ 0.3
BRAFP15056 AC006449.6-201ENST00000612330 2296 ntBASIC16.9■□□□□ 0.3
BRAFP15056 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.9■□□□□ 0.3
BRAFP15056 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
BRAFP15056 ACTG1P4-201ENST00000425123 1122 ntBASIC16.9■□□□□ 0.3
BRAFP15056 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.9■□□□□ 0.3
BRAFP15056 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 Z83851.2-201ENST00000609564 659 ntBASIC16.9■□□□□ 0.3
BRAFP15056 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.9■□□□□ 0.3
BRAFP15056 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.9■□□□□ 0.3
BRAFP15056 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.9■□□□□ 0.3
BRAFP15056 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.9■□□□□ 0.3
BRAFP15056 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRAFP15056 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BRAFP15056 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.89■□□□□ 0.3
BRAFP15056 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.89■□□□□ 0.3
BRAFP15056 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRAFP15056 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRAFP15056 AC073347.1-201ENST00000421633 2643 ntBASIC16.89■□□□□ 0.29
BRAFP15056 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 AC006277.1-201ENST00000624348 1610 ntBASIC16.89■□□□□ 0.29
BRAFP15056 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BRAFP15056 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.89■□□□□ 0.29
BRAFP15056 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.89■□□□□ 0.29
BRAFP15056 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
BRAFP15056 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRAFP15056 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.89■□□□□ 0.29
BRAFP15056 AC009947.1-201ENST00000444350 727 ntBASIC16.89■□□□□ 0.29
BRAFP15056 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.89■□□□□ 0.29
BRAFP15056 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.89■□□□□ 0.29
BRAFP15056 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms