Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.43■□□□□ 0.54
ALDH1A1P00352 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALDH1A1P00352 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 AC104581.1-202ENST00000635932 2618 ntBASIC18.42■□□□□ 0.54
ALDH1A1P00352 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 BTBD6P1-201ENST00000412176 1267 ntBASIC18.42■□□□□ 0.54
ALDH1A1P00352 CNN2P8-201ENST00000421872 913 ntBASIC18.42■□□□□ 0.54
ALDH1A1P00352 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 SCARNA20.5-201ENST00000516991 142 ntBASIC18.42■□□□□ 0.54
ALDH1A1P00352 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 AC016629.1-201ENST00000596579 586 ntBASIC18.42■□□□□ 0.54
ALDH1A1P00352 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 AL008638.5-201ENST00000623814 1298 ntBASIC18.42■□□□□ 0.54
ALDH1A1P00352 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALDH1A1P00352 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.42■□□□□ 0.54
ALDH1A1P00352 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 U82695.1-201ENST00000635752 1889 ntBASIC18.41■□□□□ 0.54
ALDH1A1P00352 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 MIR663B-201ENST00000408361 115 ntBASIC18.41■□□□□ 0.54
ALDH1A1P00352 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 EEF1DP4-201ENST00000446006 880 ntBASIC18.41■□□□□ 0.54
ALDH1A1P00352 AC004898.1-201ENST00000451057 766 ntBASIC18.41■□□□□ 0.54
ALDH1A1P00352 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 AL031731.1-201ENST00000642131 2094 ntBASIC18.41■□□□□ 0.54
ALDH1A1P00352 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALDH1A1P00352 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ALDH1A1P00352 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALDH1A1P00352 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms