Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 AC113347.1-201ENST00000413321 391 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 SPDYE21P-201ENST00000413323 827 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 AC087499.1-201ENST00000418141 1075 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.42□□□□□ -0.26
SSSCA1O60232 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.42□□□□□ -0.26
SSSCA1O60232 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.42□□□□□ -0.26
SSSCA1O60232 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 AC083849.1-201ENST00000615227 514 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 AL590326.2-201ENST00000625139 305 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.42□□□□□ -0.26
SSSCA1O60232 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SSSCA1O60232 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.42□□□□□ -0.26
SSSCA1O60232 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 GPAA1P2-202ENST00000606848 1787 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.42□□□□□ -0.26
SSSCA1O60232 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 TERF1P1-201ENST00000311003 1181 ntBASIC13.41□□□□□ -0.26
SSSCA1O60232 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.41□□□□□ -0.26
SSSCA1O60232 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.41□□□□□ -0.26
SSSCA1O60232 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SSSCA1O60232 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 AC091607.1-201ENST00000490318 1060 ntBASIC13.41□□□□□ -0.26
SSSCA1O60232 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SSSCA1O60232 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.41□□□□□ -0.26
SSSCA1O60232 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.41□□□□□ -0.26
SSSCA1O60232 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SSSCA1O60232 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSSCA1O60232 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.4□□□□□ -0.26
SSSCA1O60232 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.4□□□□□ -0.26
SSSCA1O60232 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.4□□□□□ -0.26
SSSCA1O60232 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.4□□□□□ -0.26
SSSCA1O60232 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.4□□□□□ -0.26
SSSCA1O60232 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.4□□□□□ -0.26
SSSCA1O60232 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
SSSCA1O60232 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSSCA1O60232 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.4□□□□□ -0.26
SSSCA1O60232 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms