Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CFAP99D6REC4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP99D6REC4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.41■□□□□ 0.22
CFAP99D6REC4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP99D6REC4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CFAP99D6REC4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP99D6REC4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CFAP99D6REC4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CFAP99D6REC4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFAP99D6REC4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 PCGF3-213ENST00000620529 1899 ntBASIC16.4■□□□□ 0.22
CFAP99D6REC4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 WASH6P-202ENST00000359512 1437 ntBASIC16.4■□□□□ 0.22
CFAP99D6REC4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 MKNK2P1-201ENST00000437526 628 ntBASIC16.4■□□□□ 0.22
CFAP99D6REC4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CFAP99D6REC4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFAP99D6REC4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CFAP99D6REC4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CFAP99D6REC4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CFAP99D6REC4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CFAP99D6REC4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 LINC01144-201ENST00000626198 1710 ntBASIC16.39■□□□□ 0.21
CFAP99D6REC4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 FAM86C2P-203ENST00000528684 1004 ntBASIC16.39■□□□□ 0.21
CFAP99D6REC4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 RARRES2P8-201ENST00000566335 367 ntBASIC16.39■□□□□ 0.21
CFAP99D6REC4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 AL078644.1-201ENST00000609881 752 ntBASIC16.39■□□□□ 0.21
CFAP99D6REC4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFAP99D6REC4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CFAP99D6REC4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFAP99D6REC4 HTR5BP-201ENST00000430851 1154 ntBASIC16.38■□□□□ 0.21
CFAP99D6REC4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CFAP99D6REC4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms