Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 AL732292.2-201ENST00000609649 430 ntBASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 DBET-201ENST00000630918 3363 ntBASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
GOLGA6L4A6NEF3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 AL353732.1-201ENST00000569618 1459 ntBASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 PMS2P1-201ENST00000431037 1228 ntBASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 MTDHP4-201ENST00000600287 670 ntBASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 AC091076.1-201ENST00000610741 619 ntBASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 AC004706.3-202ENST00000621574 984 ntBASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.98■□□□□ 0.63
GOLGA6L4A6NEF3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 AC087641.1-201ENST00000557561 1021 ntBASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
GOLGA6L4A6NEF3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms