Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 FAM197Y8-203ENST00000450145 560 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 AF186996.4-201ENST00000467186 377 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 AL356488.2-201ENST00000602755 427 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 AL121912.1-201ENST00000603683 238 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 GGT4P-201ENST00000623672 1708 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 LINC01144-201ENST00000626198 1710 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.42■□□□□ 0.06
IFT52Q9Y366 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IFT52Q9Y366 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.42■□□□□ 0.06
IFT52Q9Y366 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 CICP13-201ENST00000422015 2789 ntBASIC15.41■□□□□ 0.06
IFT52Q9Y366 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 POU5F1P6-201ENST00000466990 990 ntBASIC15.41■□□□□ 0.06
IFT52Q9Y366 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.41■□□□□ 0.06
IFT52Q9Y366 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 GPAA1P2-202ENST00000606848 1787 ntBASIC15.41■□□□□ 0.06
IFT52Q9Y366 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
IFT52Q9Y366 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.41■□□□□ 0.06
IFT52Q9Y366 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
IFT52Q9Y366 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFT52Q9Y366 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFT52Q9Y366 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFT52Q9Y366 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IFT52Q9Y366 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IFT52Q9Y366 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
IFT52Q9Y366 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.4■□□□□ 0.06
IFT52Q9Y366 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms