Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
RCL1Q9Y2P8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 AC097376.2-205ENST00000610159 5334 ntBASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 SSR4P1-203ENST00000599569 2260 ntBASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.47□□□□□ -0.25
RCL1Q9Y2P8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 PMPCAP1-201ENST00000508114 1576 ntBASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 AP003680.1-201ENST00000598970 3660 ntBASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 MIR648-201ENST00000385046 94 ntBASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 TERC-201ENST00000602385 541 ntBASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 LINC01144-201ENST00000626198 1710 ntBASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.46□□□□□ -0.25
RCL1Q9Y2P8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 KRT8P39-201ENST00000396270 1433 ntBASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 MYO15B-237ENST00000642007 4893 ntBASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RCL1Q9Y2P8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms