Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.89■□□□□ 0.77
HMG20BQ9P0W2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 LINC01144-201ENST00000626198 1710 ntBASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AL390754.1-201ENST00000619088 582 ntBASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 AC005622.1-201ENST00000636801 1703 ntBASIC19.88■□□□□ 0.77
HMG20BQ9P0W2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 AC061975.2-201ENST00000581722 295 ntBASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 LINC02084-201ENST00000606069 1096 ntBASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 SPDYE12P-201ENST00000618416 771 ntBASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMG20BQ9P0W2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 IGHV3-42-201ENST00000520410 361 ntBASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 MIR3197-201ENST00000582241 73 ntBASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HMG20BQ9P0W2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMG20BQ9P0W2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HMG20BQ9P0W2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.85■□□□□ 0.77
HMG20BQ9P0W2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms