Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 SPDYE13P-201ENST00000445314 798 ntBASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AC022616.7-201ENST00000525383 220 ntBASIC14.98□□□□□ -0.01
HMG20AQ9NP66 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 RNF126P1-202ENST00000569893 925 ntBASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AC083849.1-201ENST00000615227 514 ntBASIC14.98□□□□□ -0.01
HMG20AQ9NP66 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.98□□□□□ -0.01
HMG20AQ9NP66 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HMG20AQ9NP66 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AL671277.2-201ENST00000458060 996 ntBASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 SSR4P1-203ENST00000599569 2260 ntBASIC14.97□□□□□ -0.01
HMG20AQ9NP66 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 FRMD8P1-201ENST00000440433 1524 ntBASIC14.97□□□□□ -0.01
HMG20AQ9NP66 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMG20AQ9NP66 AL109954.1-202ENST00000564051 2148 ntBASIC14.96□□□□□ -0.01
HMG20AQ9NP66 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMG20AQ9NP66 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms