Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL118508.1-201ENST00000613502 2345 ntBASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 CNN2P2-201ENST00000443536 909 ntBASIC19.27■□□□□ 0.68
RNF41Q9H4P4 CNN2P3-201ENST00000450201 906 ntBASIC19.27■□□□□ 0.68
RNF41Q9H4P4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 AC015911.4-201ENST00000588022 1070 ntBASIC19.27■□□□□ 0.68
RNF41Q9H4P4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 MIR6080-201ENST00000617359 66 ntBASIC19.27■□□□□ 0.68
RNF41Q9H4P4 AL136317.3-201ENST00000618497 906 ntBASIC19.27■□□□□ 0.68
RNF41Q9H4P4 AC093028.1-201ENST00000622998 982 ntBASIC19.27■□□□□ 0.68
RNF41Q9H4P4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
RNF41Q9H4P4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF41Q9H4P4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF41Q9H4P4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF41Q9H4P4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF41Q9H4P4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 AL353705.2-201ENST00000428243 662 ntBASIC19.26■□□□□ 0.67
RNF41Q9H4P4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 AC245100.5-201ENST00000452108 331 ntBASIC19.26■□□□□ 0.67
RNF41Q9H4P4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 MTHFR-217ENST00000641820 1569 ntBASIC19.26■□□□□ 0.67
RNF41Q9H4P4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF41Q9H4P4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 Z92544.3-201ENST00000624747 417 ntBASIC19.25■□□□□ 0.67
RNF41Q9H4P4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF41Q9H4P4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms