Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 RNA5SP415-201ENST00000517246 115 ntBASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 SLC25A6P4-201ENST00000586535 553 ntBASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 ACTL9-202ENST00000612068 1252 ntBASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC68Q9H2F9 LINC01144-201ENST00000626198 1710 ntBASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 AC009947.1-201ENST00000444350 727 ntBASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 AL031432.2-201ENST00000566714 459 ntBASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 AL928711.1-201ENST00000570165 459 ntBASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 AL645728.2-201ENST00000641974 660 ntBASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC68Q9H2F9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC68Q9H2F9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms