Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 AC124067.4-201ENST00000519691 2379 ntBASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 AC138969.3-201ENST00000546612 1459 ntBASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 AC138932.2-201ENST00000548268 1459 ntBASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 AC126755.4-201ENST00000549796 1459 ntBASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SYNGAP1Q96PV0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 AL512361.1-201ENST00000554200 418 ntBASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNGAP1Q96PV0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AC087499.6-201ENST00000411576 835 ntBASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 SERBP1P3-201ENST00000459980 809 ntBASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AC061975.2-201ENST00000581722 295 ntBASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AC020765.3-201ENST00000613051 740 ntBASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 AL589702.1-201ENST00000641229 1509 ntBASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.53■□□□□ 0.56
SYNGAP1Q96PV0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNGAP1Q96PV0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNGAP1Q96PV0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SYNGAP1Q96PV0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNGAP1Q96PV0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNGAP1Q96PV0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms