Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.11■□□□□ 0.01
HPS1Q92902 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 AP005901.3-202ENST00000581653 237 ntBASIC15.11■□□□□ 0.01
HPS1Q92902 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.11■□□□□ 0.01
HPS1Q92902 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.11■□□□□ 0.01
HPS1Q92902 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.11■□□□□ 0.01
HPS1Q92902 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HPS1Q92902 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HPS1Q92902 AC046185.3-201ENST00000623228 1824 ntBASIC15.1■□□□□ 0.01
HPS1Q92902 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HPS1Q92902 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.1■□□□□ 0.01
HPS1Q92902 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.1■□□□□ 0.01
HPS1Q92902 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.1■□□□□ 0.01
HPS1Q92902 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
HPS1Q92902 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.1■□□□□ 0.01
HPS1Q92902 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.1■□□□□ 0.01
HPS1Q92902 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HPS1Q92902 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 AC015656.1-201ENST00000624209 3578 ntBASIC15.1■□□□□ 0.01
HPS1Q92902 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HPS1Q92902 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.1■□□□□ 0.01
HPS1Q92902 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HPS1Q92902 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.1■□□□□ 0.01
HPS1Q92902 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HPS1Q92902 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.09■□□□□ 0.01
HPS1Q92902 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HPS1Q92902 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HPS1Q92902 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HPS1Q92902 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms