Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 AC087481.3-201ENST00000602886 1894 ntBASIC14.5□□□□□ -0.09
AP3S1Q92572 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
AP3S1Q92572 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.49□□□□□ -0.09
AP3S1Q92572 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 CICP24-201ENST00000605464 2705 ntBASIC14.49□□□□□ -0.09
AP3S1Q92572 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 HBZP1-201ENST00000354915 429 ntBASIC14.49□□□□□ -0.09
AP3S1Q92572 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 MIR662-201ENST00000384847 95 ntBASIC14.49□□□□□ -0.09
AP3S1Q92572 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.49□□□□□ -0.09
AP3S1Q92572 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 AL138831.2-201ENST00000606564 490 ntBASIC14.49□□□□□ -0.09
AP3S1Q92572 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.49□□□□□ -0.09
AP3S1Q92572 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 SNX33P1-201ENST00000592116 1762 ntBASIC14.49□□□□□ -0.09
AP3S1Q92572 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.49□□□□□ -0.09
AP3S1Q92572 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.49□□□□□ -0.09
AP3S1Q92572 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
AP3S1Q92572 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 AC023908.3-201ENST00000564211 3047 ntBASIC14.48□□□□□ -0.09
AP3S1Q92572 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.48□□□□□ -0.09
AP3S1Q92572 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.48□□□□□ -0.09
AP3S1Q92572 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.48□□□□□ -0.09
AP3S1Q92572 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 Z99916.2-201ENST00000604037 246 ntBASIC14.48□□□□□ -0.09
AP3S1Q92572 AL390719.2-201ENST00000606993 987 ntBASIC14.48□□□□□ -0.09
AP3S1Q92572 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 AC126335.2-201ENST00000623362 4637 ntBASIC14.48□□□□□ -0.09
AP3S1Q92572 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.48□□□□□ -0.09
AP3S1Q92572 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
AP3S1Q92572 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.48□□□□□ -0.09
AP3S1Q92572 SNX18-202ENST00000343017 3140 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms