Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 AC060834.1-201ENST00000443027 2032 ntBASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
U2AF1L4Q8WU68 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
U2AF1L4Q8WU68 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
U2AF1L4Q8WU68 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
U2AF1L4Q8WU68 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
U2AF1L4Q8WU68 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 AC116353.5-201ENST00000638148 1699 ntBASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 KRT223P-202ENST00000449164 1292 ntBASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2AF1L4Q8WU68 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 AC133552.6-201ENST00000613406 534 ntBASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 FOXO1B-201ENST00000504678 1527 ntBASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U2AF1L4Q8WU68 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 AC234783.1-201ENST00000441761 496 ntBASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms